Information for 1-NGCMGCCATTTTDNWN (Motif 1)

C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
Reverse Opposite:
G C T A G C T A G A T C G A T C T C G A C G T A T C G A G T C A A C G T A C T G A C T G G T A C A C G T C A T G G T A C G C A T
p-value:1e-152
log p-value:-3.501e+02
Information Content per bp:1.578
Number of Target Sequences with motif214.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif1243.8
Percentage of Background Sequences with motif2.61%
Average Position of motif in Targets53.4 +/- 22.6bp
Average Position of motif in Background50.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NGCMGCCATTTTDNWN
-GCNGCCATCTTG---
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:NGCMGCCATTTTDNWN
-GCCGCCATCTTG---
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:NGCMGCCATTTTDNWN
GTCCGCCATTA-----
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----NGCMGCCATTTTDNWN
AAAATGGCGCCATTTT----
 A C G T A C G T A C G T A C G T C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:NGCMGCCATTTTDNWN
----GCCATCTGTT--
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:NGCMGCCATTTTDNWN
----KCTATTTTTRGH
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----NGCMGCCATTTTDNWN
AAAAATGGCGCCATTTTT---
 A C G T A C G T A C G T A C G T A C G T C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:NGCMGCCATTTTDNWN-
TGTTCCCATTGTGTACT
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:NGCMGCCATTTTDNWN
---AACCTTATAT---
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:NGCMGCCATTTTDNWN
-----CCATTGTTYB-
 C G T A C A T G G T A C T G C A C A T G T G A C A G T C C G T A A C G T A G C T C G A T A G C T C T A G C T A G C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T