Information for 3-TGACCTCCATTCC (Motif 8)

C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
Reverse Opposite:
C T A G A C T G T C G A G T C A A C G T A C T G A C T G C G T A A C T G A T C G A G C T A G T C C G T A
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.774
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets56.4 +/- 25.5bp
Average Position of motif in Background50.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGACCTCCATTCC
-GTCCGCCATTA-
 C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCTCCATTCC
TGACCTTGAT---
 C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCTCCATTCC
TGACCYCT-----
 C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGACCTCCATTCC
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACCTCCATTCC
TGACCTARTT---
 C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGACCTCCATTCC--
-----CACATTCCAT
 C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TGACCTCCATTCC-
------ACATTCCA
 C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTCCATTCC
TTGACCTANTTATN
 A C G T C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGACCTCCATTCC-
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGACCTCCATTCC
TGACCT-------
 C G A T T C A G C T G A A T G C G T A C C G A T A G T C A G T C G T C A C A G T A G C T T G A C A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T