Information for 18-TGCTCRTGACCCT (Motif 39)

A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A C G T A G T C C G T A A G C T T C A G C T G A C T A G A G T C G T C A
p-value:1e-6
log p-value:-1.446e+01
Information Content per bp:1.866
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 28.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGCTCRTGACCCT--
--CNNTTGACCTTTG
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGCTCRTGACCCT-----
--NNNNTGACCTTTNNNN
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TGCTCRTGACCCT
------TGACCT-
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGCTCRTGACCCT-----
-TGTCGTGACCCCTTAAT
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:TGCTCRTGACCCT-
------TGACCYCT
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGCTCRTGACCCT-----
--NNNGTGACCTTTGNNN
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGCTCRTGACCCT-----
-NNNNTTGACCCCTNNNN
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGCTCRTGACCCT-----
--NNNNTGACCCGGCGCG
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TGCTCRTGACCCT--
-----AAGACCCYYN
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TGCTCRTGACCCT--
-----NTGACCTTGA
 A C G T A C T G A G T C A G C T A G T C C T A G A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A