Information for 2-AAGGAAGGCA (Motif 3)

C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A
Reverse Opposite:
C G A T A T C G A T G C A G T C A G C T G A C T A G T C G A T C A G C T A G C T
p-value:1e-14
log p-value:-3.315e+01
Information Content per bp:1.733
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.39%
Number of Background Sequences with motif421.9
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets51.0 +/- 28.2bp
Average Position of motif in Background50.8 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGAAGGCA-----
AGGGAAGTCATTTCT
 C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AAGGAAGGCA
--NGAAGC--
 C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAGGCA------
GGAAGGAAGGAAGGAAGG
 A C G T A C G T C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAAGGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGGAAGGCA-
--GGTTGGCAT
 C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAGGCA
AVCAGGAAGT--
 A C G T A C G T C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAGGAAGGCA-
--NGTGGGCAT
 C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGGAAGGCA
AACAAGGAAGTAA
 A C G T A C G T A C G T C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAGGAAGGCA-----
----AAGGCAAGTGT
 C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAGGCA
ANCAGGAAGT--
 A C G T A C G T C T G A T C G A C T A G A C T G C T G A C T G A A C T G T A C G T A G C C G T A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T