Information for 9-GGCATTTGGATTG (Motif 28)

A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A G T C A A C G T A G T C A G T C C G T A C T G A C G T A C G A T A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 18.5bp
Average Position of motif in Background46.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGCATTTGGATTG--
----TGTGGATTNNN
 A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCATTTGGATTG
CACGGCAGTTGGTNN-
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGCATTTGGATTG
NNNTGGCAGTTGGTNN-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCATTTGGATTG
CTCATTTGCATW-
 A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCATTTGGATTG
TGGCAGTTGG----
 A C G T A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCATTTGGATTG-
--NNTGTGGATTSS
 A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCATTTGGATTG
GGGAATTGTAGT-
 A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCATTTGGATTG
TTCATTTGCATAT
 A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCATTTGGATTG
BTVATTWGCATA-
 A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCATTTGGATTG
-ACATATGG----
 A C T G A C T G A G T C C G T A A C G T A G C T C G A T A C T G A C T G C G T A A C G T A C G T A C T G
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T