Information for 10-ACACGTGTSAAMAGTC (Motif 12)

C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
Reverse Opposite:
A T C G G T C A G A T C A C G T A C T G A C G T G C A T A T G C C G T A A T G C C G T A A G T C A T C G A C G T C T A G A G C T
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.755
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 19.8bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTSAAMAGTC
AACACGTGTT-------
 A C G T C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACACGTGTSAAMAGTC
-CACGTGDC-------
 C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTGTSAAMAGTC
GGCACGTGNC-------
 A C G T C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTSAAMAGTC
GGCACGTGTC-------
 A C G T C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTSAAMAGTC
NVCACGTG---------
 A C G T C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACACGTGTSAAMAGTC
-CACGTGNC-------
 C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACACGTGTSAAMAGTC
GCACGTGTCNNNN---
 C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTGTSAAMAGTC
GGCACGTGTC-------
 A C G T C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACACGTGTSAAMAGTC
GCACGTGA--------
 C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACACGTGTSAAMAGTC
-CACGTG---------
 C T G A A G T C C G T A A T G C A C T G A C G T T A C G C G A T A T C G C G T A C G T A G T A C C G T A C A T G C A G T A T G C
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T