Information for 21-GATACCCATCATC (Motif 28)

A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G C G T A A C G T A C T G A C T G A C T G A C G T C G T A A C G T A G T C
p-value:1e-3
log p-value:-8.750e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 21.9bp
Average Position of motif in Background49.7 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GATACCCATCATC
NAGATWNBNATCTNN
 A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCATCATC
ANANNTGATACCCNATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCATCATC
AATNTTGATACCCTATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATACCCATCATC
GYCATCMATCAT-
 A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCATCATC
ANANGTGATACCCTATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCATCATC
ANANGTGATACCCTATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCATCATC
ANANNTGATACCCTATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GATACCCATCATC-
NTTATTCGTCATNC
 A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GATACCCATCATC-----
-TCACCCATCAATAAACA
 A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PH0017.1_Cux1_2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GATACCCATCATC----
--TAGTGATCATCATTA
 A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A