p-value: | 1e-10 |
log p-value: | -2.492e+01 |
Information Content per bp: | 1.775 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 52.0 +/- 15.4bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GATGTKSTTATCACTT ------ATTAACACCT |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GATGTKSTTATCACTT--- ---------ACCACTTGAA |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GATGTKSTTATCACTT-- ---------ACCACTTAA |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GATGTKSTTATCACTT-- ---------ACCACTTAA |
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PB0022.1_Gata5_1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GATGTKSTTATCACTT-- -NTNTTCTTATCAGTNTN |
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GATA2/MA0036.2/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GATGTKSTTATCACTT -AGATTCTTATCTGT- |
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Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GATGTKSTTATCACTT- -------TTMACACCTT |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GATGTKSTTATCACTT--- ----------CCACTTGAA |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GATGTKSTTATCACTT-- --------MRSCACTYAA |
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Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GATGTKSTTATCACTT ------KTTCACACCT |
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