Information for 5-TGAAGCCTGTCCAVTT (Motif 6)

C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
Reverse Opposite:
G T C A G T C A A G T C A G C T A C T G C T A G C T G A A G T C G T C A A C T G C T A G A T G C A C G T A C G T A G T C C G T A
p-value:1e-15
log p-value:-3.667e+01
Information Content per bp:1.772
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.6 +/- 16.9bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCTGTCCAVTT
NGAAGC----------
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCTGTCCAVTT
TGGACTTTGNNCTNTG
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCTGTCCAVTT
TGACACCTGTCA----
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TGAAGCCTGTCCAVTT
--AAGCTTG-------
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCTGTCCAVTT
TGACACCTGTCA----
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCTGTCCAVTT
TGGACTTTGNNCTCN-
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--TGAAGCCTGTCCAVTT
ACTGAAACCA--------
 A C G T A C G T C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:TGAAGCCTGTCCAVTT
TGACAGCTGTCA----
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.46
Offset:3
Orientation:forward strand
Alignment:TGAAGCCTGTCCAVTT--
---ACCGTGACTAATTNN
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:TGAAGCCTGTCCAVTT
--AAACCGGTTT----
 C G A T A C T G C G T A C G T A A T C G A G T C G T A C A C G T A C T G A G C T A G T C G T A C C T G A T A C G A C G T A C G T
A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T A C G T A C G T