Information for 16-CCTCTTGGCCACA (Motif 17)

G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T A C T G C T A G A G T C A G T C G T C A T C G A C T A G G T C A A C T G C A T G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.842
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.9 +/- 17.8bp
Average Position of motif in Background46.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTCTTGGCCACA-
--SCCTAGCAACAG
 G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCTCTTGGCCACA---
NNNNTTGGGCACNNCN
 G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCTCTTGGCCACA------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCTCTTGGCCACA
----TTGGCA---
 G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCTTGGCCACA
CCACGTGGNN---
 G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A
T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCTCTTGGCCACA---
----NWAACCACADNN
 G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCTCTTGGCCACA
TGTTKCCTAGCAACM
 A C G T A C G T G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTCTTGGCCACA
-CACGTGGC----
 G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A
A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTCTTGGCCACA
---NTTGGCANN-
 G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCTCTTGGCCACA
GTTGCCATGGCAAC-
 A C G T A C G T G T A C A G T C A C G T A G T C A C G T A C G T A C T G A C T G A G T C A G T C C T G A A G T C C G T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T