Information for 12-KGTTTCACAT (Motif 20)

C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T
Reverse Opposite:
T C G A G C A T A T C G C A G T T C A G G C T A G T C A C G T A G A T C G T A C
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.673
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif955.7
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets48.7 +/- 25.0bp
Average Position of motif in Background49.9 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-KGTTTCACAT
TGGTTTCAGT-
 A C G T C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-KGTTTCACAT------
NNTTTTCACACCTTNNN
 A C G T C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KGTTTCACAT
KTTCACACCT
 C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KGTTTCACAT--
ASTTTCACTTCC
 C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T A C G T A C G T
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KGTTTCACAT--
--TTTCACACCT
 C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T A C G T A C G T
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:KGTTTCACAT---
-GTTTCACTTCCG
 C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T A C G T A C G T A C G T
A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KGTTTCACAT
CGGTTTCAAA-
 A C G T C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KGTTTCACAT--
-ATTGCACAATA
 C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:KGTTTCACAT--
AGTTTCAGTTTC
 C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T A C G T A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--KGTTTCACAT
GGGATTGCATNN
 A C G T A C G T C A T G C T A G A C G T A C G T C G A T A G T C G T C A T A G C C G T A A G C T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T