Information for 8-GGGAATTCCC (Motif 15)

A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C
Reverse Opposite:
C T A G C T A G A C T G T G C A G C T A G A C T A C G T A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.759
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif268.3
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets44.5 +/- 23.5bp
Average Position of motif in Background46.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GGGAATTCCC
GGAAATTCCC
 A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTCCC
NGGGGATTTCCC
 A C G T A C G T A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGGAATTCCC
GGAAATTCCC
 A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGGAATTCCC
GGAAATCCCC
 A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGGAATTCCC
GGGGATTTCC-
 A C G T A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTCCC
GGGGGAATCCCC
 A C G T A C G T A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GGGAATTCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGAATTCCC--
--RCATTCCWGG
 A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C A C G T A C G T
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGAATTCCC------
GGGTGTGCCCAAAAGG
 A C T G A C T G C T A G G T C A C T G A C G A T A C G T A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G