Information for 12-CAKCTGARAMARA (Motif 12)

A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
Reverse Opposite:
A G C T A G T C C G A T A C T G A C G T A G T C A C G T A G T C C G T A A C T G G T A C A C G T A C T G
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.857
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.8 +/- 25.6bp
Average Position of motif in Background56.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CAKCTGARAMARA
NAHCAGCTGD------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAKCTGARAMARA
ANCAGCTG-------
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAKCTGARAMARA
AACAGCTG-------
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAKCTGARAMARA
NVCAGCTGBBNN---
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAKCTGARAMARA
AACAGCTGAT-----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAKCTGARAMARA
NNACAGCTGC------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAKCTGARAMARA
GACAGCTGCAG----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAKCTGARAMARA
NAACAGCTGT------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAKCTGARAMARA
AACAGCTGCAG----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAKCTGARAMARA
BAACAGCTGT------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A C T A G G T C A G T A C C G T A C T A G C T G A
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T