Information for 10-CAAAAGGGGATTT (Motif 10)

A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T
Reverse Opposite:
C G T A C G T A C T G A A C G T A G T C A G T C A G T C A G T C C G A T A C G T C G A T A C G T A C T G
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.9 +/- 27.8bp
Average Position of motif in Background34.9 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAAAGGGGATTT-----
-TTAAGGGGATTAACTAC
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAAAAGGGGATTT---
----NGGGGATTTCCC
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAAAGGGGATTT---
-AAAAACGGATTATTG
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T A C G T A C G T
A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAAAAGGGGATTT
----TGGGGA---
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAAAAGGGGATTT-
---AAGAGGATTAG
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAAAGGGGATTT-
AAAAAGCGGAAGTA
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAAAAGGGGATTT--
-----GGGGATTTCC
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

SPIC/MA0687.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAAAGGGGATTT-
AAAAAGAGGAAGTA
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CAAAAGGGGATTT--
-----GGGAATTTCC
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAAAGGGGATTT-----
-TGAGGGGGATTAACTAT
 A G T C C G T A C G T A C G T A C G T A C T A G A C T G A C T G A C T G C G T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T