Information for 5-GMAMTTCCCM (Motif 4)

C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A
Reverse Opposite:
A C G T A T C G C T A G C T A G T G C A T C G A C A T G A G C T C A T G G A T C
p-value:1e-16
log p-value:-3.778e+01
Information Content per bp:1.543
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif2488.0
Percentage of Background Sequences with motif6.07%
Average Position of motif in Targets52.6 +/- 26.5bp
Average Position of motif in Background50.3 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GMAMTTCCCM
GGAAATTCCC-
 A C G T C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GMAMTTCCCM----
NNACTTCCTCTTNN
 C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A A C G T A C G T A C G T A C G T
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GMAMTTCCCM
GGAAATTCCC-
 A C G T C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GMAMTTCCCM
GGAAATCCCC-
 A C G T C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GMAMTTCCCM
ACTACAATTCCC-
 A C G T A C G T A C G T C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GMAMTTCCCM
GGGAAATCCCCN
 A C G T A C G T C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

ETV6/MA0645.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GMAMTTCCCM-
-CACTTCCGCT
 C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A A C G T
A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GMAMTTCCCM-
-CACTTCCTCT
 C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A A C G T
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:GMAMTTCCCM-
-----TCCCCA
 C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GMAMTTCCCM---
-CACTTCCYCTTT
 C T A G G T A C T C G A G T A C A G C T A C G T G A T C G A T C T A G C T G C A A C G T A C G T A C G T
A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T