Information for 15-CGTCTCGGGC (Motif 23)

A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C
Reverse Opposite:
A T C G A G T C A G T C G A T C C T A G C G T A A T C G C G T A A G T C A C T G
p-value:1e-7
log p-value:-1.630e+01
Information Content per bp:1.869
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif106.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets43.7 +/- 28.4bp
Average Position of motif in Background49.6 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTCTCGGGC-
TGCCTGAGGCN
 A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTCTCGGGC-
NGCCTNAGGCN
 A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTCTCGGGC-
NGCCTGAGGCN
 A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGTCTCGGGC---
NTNGCCTCAGGCNNN
 A C G T A C G T A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGTCTCGGGC------
NNNNTTGGGCACNNCN
 A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGTCTCGGGC
CTGTCTGG---
 A C G T A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGTCTCGGGC
VBSYGTCTGG---
 A C G T A C G T A C G T A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGTCTCGGGC
TAAGGCGTCTTG---
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGTCTCGGGC---
NTCGCCTCAGGCAAT
 A C G T A C G T A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C A C G T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGTCTCGGGC---
ANTGCCTGAGGCAAN
 A C G T A C G T A G T C A C T G A C G T A T G C A C G T A G T C C T A G A C T G A C T G T A G C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T