Information for 2-KBCCATATATGGG (Motif 2)

A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
Reverse Opposite:
T A G C A T G C A G T C C G T A G C A T C G T A G C A T C G T A G C A T C T A G A C T G T A G C T G C A
p-value:1e-34
log p-value:-8.019e+01
Information Content per bp:1.614
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif9.43%
Number of Background Sequences with motif765.2
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets49.8 +/- 18.0bp
Average Position of motif in Background50.5 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:KBCCATATATGGG
TNCCATATATGG-
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:KBCCATATATGGG-
TNCCATATATGGNA
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:KBCCATATATGGG
--CCATATATGG-
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

SRF/MA0083.3/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-KBCCATATATGGG--
TGNCCATATATGGTCA
 A C G T A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:KBCCATATATGGG
GNCTATAAAAGG-
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--KBCCATATATGGG
GNNCGCTTAAATCGG
 A C G T A C G T A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KBCCATATATGGG
-KCCAAAAATAGC
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KBCCATATATGGG
--CCAAAAATAG-
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:KBCCATATATGGG-
----NNATAAGGNN
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G A C G T
A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KBCCATATATGGG
-ACCATATGTT--
 A C G T A T C G T A G C A G T C C G T A G C A T C G T A C G A T C G T A C G A T C T A G A T C G A C T G
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T