Information for 13-AGGAGACTGTGTG (Motif 18)

C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C T G C A G T A C C G T A A T G C C T G A A T C G A C G T A T G C C A G T A G T C T A G C C G A T
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.772
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.6 +/- 30.5bp
Average Position of motif in Background47.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGGAGACTGTGTG-----
--NNGCGTGTGTGCNGCN
 C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGAGACTGTGTG
AGGVNCCTTTGT-
 C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGAGACTGTGTG-
VAGRACAKWCTGTYC
 A C G T C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGACTGTGTG--
NAGAACAGNCTGTNCT
 A C G T C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGAGACTGTGTG-
VAGRACAKNCTGTBC
 A C G T C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGGAGACTGTGTG
-----GCTGTG--
 C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGAGACTGTGTG--
NAGNACANNNTGTNCT
 A C G T C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGAGACTGTGTG-
AAGAACATWHTGTTC
 A C G T C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGGAGACTGTGTG
------CTTTGT-
 C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGACTGTGTG---
GGGAACATTGTGTTCCC
 A C G T C G T A A C T G C T A G G T C A A T C G G T C A A T G C A G C T A T C G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C