Information for 5-GCWCCTCAKGCATCTC (Motif 12)

A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
Reverse Opposite:
A C T G G C T A A C T G G T C A G A C T A C T G A G T C T G C A G C A T A C T G C T G A A C T G T A C G C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.772
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.6 +/- 22.8bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCWCCTCAKGCATCTC
-CGCCTCAGGCA----
 A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCWCCTCAKGCATCTC
--GGCTCYAKCAYC--
 A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCWCCTCAKGCATCTC
CCACCTGTTGCAT---
 A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GCWCCTCAKGCATCTC
-AGCCTCAGGCA----
 A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---GCWCCTCAKGCATCTC-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GCWCCTCAKGCATCTC
GCTCCG----------
 A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.46
Offset:1
Orientation:forward strand
Alignment:GCWCCTCAKGCATCTC
-AGCCTCAGGCA----
 A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-GCWCCTCAKGCATCTC
TGCCCTGAGGGCA----
 A C G T A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.45
Offset:-3
Orientation:forward strand
Alignment:---GCWCCTCAKGCATCTC
GGGGCTYGKCTGGGA----
 A C G T A C G T A C G T A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.45
Offset:-4
Orientation:forward strand
Alignment:----GCWCCTCAKGCATCTC-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T A T G C A G T C A G C T A G T C C G T A A C G T C T A G G T A C C T G A A C G T A G T C C A G T A G T C A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C