Information for 8-YTTKMTTGCAGRA (Motif 11)

A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G A T A C T G A G T C C T G A C G T A A C T G G T C A C G T A C G T A C T A G
p-value:1e-12
log p-value:-2.922e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.3 +/- 33.2bp
Average Position of motif in Background40.1 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:YTTKMTTGCAGRA--
----ATTGCACAATA
 A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------YTTKMTTGCAGRA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

Hoxd9/MA0913.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-YTTKMTTGCAGRA
TTTTTATTGC----
 A C G T A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------YTTKMTTGCAGRA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YTTKMTTGCAGRA
TTTTATGGCTN--
 A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YTTKMTTGCAGRA----
--CAATTGCAAAAATAT
 A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YTTKMTTGCAGRA
TTTTATTGC----
 A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-YTTKMTTGCAGRA
NTTTTATGAC----
 A C G T A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-YTTKMTTGCAGRA
NTTTTATTACN---
 A C G T A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:YTTKMTTGCAGRA
-TTGATTGN----
 A G T C A C G T A C G T A C G T G T A C A C G T A G C T A C T G A G T C C G T A A C T G C T A G C G T A
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T