Information for 13-TGCCAAGGGT (Motif 31)

A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C C G T A
p-value:1e-5
log p-value:-1.279e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 28.3bp
Average Position of motif in Background42.2 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGGGT
GGTGCCAAGT--
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGGGT
TTGCCAAG---
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGGGT
CGTGCCAAG---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGCCAAGGGT
TGCCAA----
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGGGT
ATGCCAACC--
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCCAAGGGT
TGCCCAGNHW
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCCAAGGGT--
TGTCAGGGGGCG
 A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGGGT
ATGCCCACC--
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGGGT--
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-9
Orientation:reverse strand
Alignment:---------TGCCAAGGGT----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A