Information for 11-WTGCACAGAGCACYSG (Motif 29)

C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
Reverse Opposite:
A T G C A T G C C T G A C T A G A C G T A C T G A T G C A C G T A G T C A C G T A C T G A C G T A T C G A G T C G T C A G C A T
p-value:1e-7
log p-value:-1.642e+01
Information Content per bp:1.746
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 15.1bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WTGCACAGAGCACYSG
TTTGCACACGGCAC---
 A C G T C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:WTGCACAGAGCACYSG
---CACAGN-------
 C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--WTGCACAGAGCACYSG
CCAGGAACAG--------
 A C G T A C G T C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WTGCACAGAGCACYSG
GCCGCGCAGTGCGT---
 A C G T C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--WTGCACAGAGCACYSG
CGAAGCACACAAAATA--
 A C G T A C G T C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---WTGCACAGAGCACYSG
NNTTTGCACACGGCCC---
 A C G T A C G T A C G T C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:WTGCACAGAGCACYSG
-TGCCCAGNHW-----
 C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-WTGCACAGAGCACYSG
AAACCACAGAN------
 A C G T C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:WTGCACAGAGCACYSG
----ACAAAG------
 C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-WTGCACAGAGCACYSG
AAACCACAGC-------
 A C G T C G T A A C G T A C T G A T G C C G T A A G T C C G T A A C T G T G C A A T C G A G T C T G C A G A T C G A C T T A C G A T C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T