Information for 1-GTGCCTTTCC (Motif 1)

A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C
Reverse Opposite:
C A T G T A C G T C G A T C G A C T G A T A C G T C A G A G T C C G T A T A G C
p-value:1e-13
log p-value:-3.100e+01
Information Content per bp:1.654
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif13.12%
Number of Background Sequences with motif2671.2
Percentage of Background Sequences with motif5.98%
Average Position of motif in Targets47.3 +/- 26.2bp
Average Position of motif in Background49.4 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTGCCTTTCC-
-TKCTGTTCCA
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGCCTTTCC
GGGGATTTCC
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGCCTTTCC
GGGAATTTCC
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGCCTTTCC
GGGGATTTCC
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGCCTTTCC--
NNGCACCTTTCTCC
 A C G T A C G T A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTGCCTTTCC---
---ATTTTCCATT
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTGCCTTTCC
NNACTTGCCTT---
 A C G T A C G T A C G T A C G T A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTGCCTTTCC---
---ATTTTCCATT
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGCCTTTCC---
-KGCCCTTCCCCA
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C A C G T A C G T A C G T
A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTGCCTTTCC-
----TTTTCCA
 A T C G G C A T T C A G A G T C A T G C G A C T A G C T A G C T A T G C G T A C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A