Information for 4-AGCGCCCTCT (Motif 5)

C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A C T A G A C T G A C T G A G T C T C A G A T G C G A C T
p-value:1e-13
log p-value:-3.203e+01
Information Content per bp:1.859
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif110.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets58.2 +/- 21.8bp
Average Position of motif in Background50.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCCTCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCCTCT--------
TAGCGCCCCCTGGTGGCCA
 A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCCTCT----
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCCTCT--------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGCGCCCTCT-
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGCGCCCTCT-
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGCGCCCTCT-
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCGCCCTCT--
--CRCCCACGCA
 C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T A C G T
A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCGCCCTCT--
YCCGCCCACGCN
 C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

E2F3/MA0469.2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGCGCCCTCT--
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G A G T C C T A G A G T C A G T C A G T C C G A T A T G C A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T