Information for 11-TCMGSTRACC (Motif 17)

G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C
Reverse Opposite:
C T A G C T A G A C G T G A C T G C T A T A C G A T G C A C T G T A C G C G T A
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.677
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif361.7
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets48.8 +/- 23.8bp
Average Position of motif in Background50.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCMGSTRACC----
-CNNTTGACCTTTG
 G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCMGSTRACC--
TCACGTGACCGG
 G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C A C G T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCMGSTRACC
GCCACGTGACC
 A C G T G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCMGSTRACC-
-----TGACCT
 G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TCMGSTRACC---
-----TGACCYCT
 G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCMGSTRACC
GTCATGTGACC
 A C G T G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCMGSTRACC-
GTCACGTGACYV
 A C G T G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C A C G T
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCMGSTRACC--
-NNACTTACCTN
 G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C A C G T A C G T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCMGSTRACC
RTCATGTGAC-
 A C G T G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCMGSTRACC-----
-----TGACCTTGAT
 G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T