Information for 4-CGCCCTCCGC (Motif 4)

A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C
Reverse Opposite:
T A C G G T A C T C A G A C T G C G T A A T C G A C T G C T A G G T A C T C A G
p-value:1e-18
log p-value:-4.300e+01
Information Content per bp:1.761
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.44%
Number of Background Sequences with motif676.8
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets55.7 +/- 28.0bp
Average Position of motif in Background50.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGCCCTCCGC--
CAACGTCCGCGG
 A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C A C G T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCCGC--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCCGC
GCCMCGCCCMCY--
 A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CGCCCTCCGC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCGC-
-GCCATCTGTT
 A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCCCTCCGC
VBSYGTCTGG
 A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGCCCTCCGC
GGCGACCACCGA
 A C G T A C G T A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCCCTCCGC-----
CCGTCTTCCCCCTCAC
 A C G T A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCTCCGC---
NNGCNCTGCGCGGC
 A C G T A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCCGC
GCTCCGCCCMCY--
 A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C A T G C A C G T A G T C A G T C A C T G A T G C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T