Information for 3-AGAGGGCGCTCTCTSC (Motif 2)

T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
Reverse Opposite:
A C T G A T G C C G T A C T A G T G C A A C T G T C G A A C T G A G T C C T A G T A G C A G T C G T A C A G C T A G T C A C G T
p-value:1e-33
log p-value:-7.600e+01
Information Content per bp:1.685
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif52.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets47.5 +/- 17.2bp
Average Position of motif in Background50.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTCTCTSC
NNNGGGGCGCCCCCNN-
 A C G T T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCGCTCTCTSC
ATAAGGGCGCGCGAT--
 A C G T T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCGCTCTCTSC
ATAAAGGCGCGCGAT--
 A C G T T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGCGCTCTCTSC
AAAAATGGCGCCATTTTT
 A C G T A C G T T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGAGGGCGCTCTCTSC
------NGCTN-----
 T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCGCTCTCTSC
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGAGGGCGCTCTCTSC
AGATGCTRCTRCCHT-
 T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAGGGCGCTCTCTSC
--AGCGCGCC------
 T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGGCGCTCTCTSC
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAGGGCGCTCTCTSC
--RGGGCACTAACY--
 T G C A C T A G C T G A A C T G A C T G A T C G G A T C A C T G A G T C A G C T T A G C A C G T A G T C G C A T T A C G A G T C
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T