Information for 12-CGGCCGCAAGTGC (Motif 12)

G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C
Reverse Opposite:
C T A G A T G C G T C A A G T C A C G T A C G T A C T G A G T C C A T G A C T G A T G C G T A C A C T G
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.805
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.2 +/- 26.9bp
Average Position of motif in Background48.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGGCCGCAAGTGC--
---SDGCAGGTGCNS
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CGGCCGCAAGTGC--
-----KCACGTGMCN
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGGCCGCAAGTGC-----
-ATCCACAGGTGCGAAAA
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

MNT/MA0825.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGGCCGCAAGTGC-
----ACCACGTGCC
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

BHLHE40/MA0464.2/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGGCCGCAAGTGC-
----ATCACGTGAC
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CGGCCGCAAGTGC-
----NNCAGGTGTN
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CGGCCGCAAGTGC-
----NNCAGGTGCG
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CGGCCGCAAGTGC-
----GGCACGTGTC
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CGGCCGCAAGTGC
----AACAGGTGT
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CGGCCGCAAGTGC--
-----CCACGTGGNN
 G T A C A C T G A T C G T A G C G A T C A C T G A G T C C G T A T G C A A C T G A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C