Information for 7-GGGCAGGGCAGGGCAG (Motif 21)

C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
Reverse Opposite:
T A G C C G A T A C T G A T G C A G T C A G T C A C G T A T C G A G T C A G T C A G T C G A C T A C T G G T A C A T G C A G T C
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.755
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets65.0 +/- 22.9bp
Average Position of motif in Background44.9 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGCAGGGCAGGGCAG
GGTCANYTGAGGWCA-
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGGCAGGGCAGGGCAG
--GCCGCGCAGTGCGT
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGCAGGGCAGGGCAG
---TGGGGAAGGGCM-
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GGGCAGGGCAGGGCAG
-------TNNGGGCAG
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGGCAGGGCAGGGCAG
-------NGTGGGCAT
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGGCAGGGCAGGGCAG
---GGGGGCGGGGCC-
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGGGCAGGGCAG
AGGGGGCGGGGCTG-----
 A C G T A C G T A C G T C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAGGGCAGGGCAG
GGGNGGGGGCGGGGC--
 A C G T C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGGCAGGGCAGGGCAG
----GGGGNGGGGC--
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGCAGGGCAGGGCAG
----TGGGTGGGGC--
 C T A G A T C G A C T G T A G C C T G A A C T G C T A G C T A G A T G C G T C A A C T G C T A G A T C G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T