Information for 13-ATCGCTGTTAGAC (Motif 16)

G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C A G C T C T G A C G T A A T G C C T G A A C T G G T A C A C T G G T C A A C G T
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.838
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 22.4bp
Average Position of motif in Background24.2 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATCGCTGTTAGAC-
--AGGTGHCAGACA
 G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:ATCGCTGTTAGAC--
-------BCAGACWA
 G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATCGCTGTTAGAC--
AAGACGCTGTAAAGCGA
 A C G T A C G T G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATCGCTGTTAGAC--
AAGACGCTGTAAAGCGA
 A C G T A C G T G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ATCGCTGTTAGAC--
--AGGTGNCAGACAG
 G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ATCGCTGTTAGAC--
-TCACCTCTGGGCAG
 G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T A C G T
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ATCGCTGTTAGAC-
CAATCACTGGCAGAAT
 A C G T A C G T G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ATCGCTGTTAGAC--
AGGACGCTGTAAAGGGA
 A C G T A C G T G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ATCGCTGTTAGAC
-TGGCAGTTGG--
 G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:ATCGCTGTTAGAC----
--AACCGTTAAACGGTC
 G T C A A C G T A G T C C A T G A G T C A G C T A T C G A C G T A G C T C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C