Information for 10-AGTGGCTTGC (Motif 14)

G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
Reverse Opposite:
C A T G T G A C T G C A G T C A A T C G G A T C T A G C T G C A T A G C C A G T
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.651
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif12.06%
Number of Background Sequences with motif2838.3
Percentage of Background Sequences with motif6.27%
Average Position of motif in Targets56.1 +/- 26.3bp
Average Position of motif in Background48.7 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTTGC
AANTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTTGC
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTTGC
AAATTCAAGTGGNTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTTGC
AATNTTAAGTGGNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTGGCTTGC
TTRAGTGSYK---
 A C G T A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGCTTGC
TTGAGTGSTT---
 A C G T A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGTGGCTTGC
NNTGTGGATTSS
 A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTGGCTTGC--
AGAAATGACTTCCCT
 A C G T A C G T A C G T G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTGGCTTGC---
-GTGGCGTGACNG
 G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTGGCTTGC-
TGTGGATTNNN
 G T C A A T C G A C G T A T C G C T A G T A G C C A G T A C G T A C T G G T A C A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A