Information for 3-HTGTGGTTAD (Motif 3)

G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
Reverse Opposite:
G C T A G C A T C T G A G T C A A G T C G T A C G T C A A G T C G C T A C T G A
p-value:1e-35
log p-value:-8.227e+01
Information Content per bp:1.629
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif19.21%
Number of Background Sequences with motif2892.7
Percentage of Background Sequences with motif6.16%
Average Position of motif in Targets50.9 +/- 26.4bp
Average Position of motif in Background49.7 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--HTGTGGTTAD
NNHTGTGGTTWN
 A C G T A C G T G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:HTGTGGTTAD
CTGTGGTTTN
 G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-HTGTGGTTAD
NNTGTGGTTT-
 A C G T G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-HTGTGGTTAD
GCTGTGGTTT-
 A C G T G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--HTGTGGTTAD
GTCTGTGGTTT-
 A C G T A C G T G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-HTGTGGTTAD
TTTGCGGTTT-
 A C G T G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:HTGTGGTTAD
TTGCGGTTT-
 G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:HTGTGGTTAD
--GTGGAT--
 G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:HTGTGGTTAD--
-TGTGGATTNNN
 G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--HTGTGGTTAD
NTCGGTGGTCGC
 A C G T A C G T G A C T C G A T T C A G C A G T A C T G C T A G C A G T G A C T C G T A C G A T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C