Information for 2-TCBCTCBTTGTTCTGG (Motif 2)

A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G
Reverse Opposite:
G T A C A T G C C G T A A C T G C G T A C G T A A G T C G T C A C G T A T A C G A C T G C G T A A C T G T A C G C T A G C G T A
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.779
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.8 +/- 19.9bp
Average Position of motif in Background56.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCBCTCBTTGTTCTGG-
TNNTCCTTTGTTCTNNT
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCBCTCBTTGTTCTGG-
NNNTCCTTTGTTCTNNN
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCBCTCBTTGTTCTGG
----YCTTTGTTCC--
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCBCTCBTTGTTCTGG--
----TAATTGTTCTAAAC
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCBCTCBTTGTTCTGG
----CCATTGTTTT--
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCBCTCBTTGTTCTGG----
-----BCNGGTTCTAGANCN
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCBCTCBTTGTTCTGG
---NCCATTGTTC---
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCBCTCBTTGTTCTGG----
---NNCTTTGTTTTGNTNNN
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCBCTCBTTGTTCTGG
----CCATTGTTNY--
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCBCTCBTTGTTCTGG
----CCTTTGTTTT--
 A C G T A G T C A G T C A G T C C G A T G T A C A G T C A C G T A C G T T C A G A C G T A C G T A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T