Information for 3-GGAVTASTGTGACCGC (Motif 3)

A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C
Reverse Opposite:
A T C G A G T C A T C G A C T G A G C T A G T C C G T A G T A C C G T A A T G C A C G T G T C A A C G T A C G T A T G C G T A C
p-value:1e-16
log p-value:-3.707e+01
Information Content per bp:1.724
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.7 +/- 15.9bp
Average Position of motif in Background59.3 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGAVTASTGTGACCGC-----
----GATATTGACAGCTGCGT
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.60
Offset:8
Orientation:forward strand
Alignment:GGAVTASTGTGACCGC
--------TTGACAGC
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGAVTASTGTGACCGC-----
-----NNATTGACAGGTGCTT
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.58
Offset:8
Orientation:forward strand
Alignment:GGAVTASTGTGACCGC
--------TTGACAGG
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAVTASTGTGACCGC-----
-----NTATTGACAGCTNNTT
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAVTASTGTGACCGC-----
-----GGATTGACAGGTCNTT
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAVTASTGTGACCGC-----
-----NTATTGACAGGTNNTN
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAVTASTGTGACCGC-----
-----GTATTGACAGGTNNTT
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAVTASTGTGACCGC-----
-----GTATTGACAGCTNNTT
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGAVTASTGTGACCGC
---GTGGCGTGACNG-
 A C T G A T C G G T C A T C G A A C G T G T C A A T C G C G A T C A T G A C G T C T A G C T G A G T A C T A G C A C T G A T G C
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T