Information for 8-CTAGTGTRAA (Motif 13)

A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A
Reverse Opposite:
C G A T A G C T A G T C C T G A A G T C C T G A T G A C C G A T C G T A A C T G
p-value:1e-6
log p-value:-1.469e+01
Information Content per bp:1.725
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.11%
Number of Background Sequences with motif289.2
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets43.8 +/- 22.9bp
Average Position of motif in Background49.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTAGTGTRAA-
-AGGTGTGAAM
A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAGTGTRAA-
-AGGTGTGAAA
A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTAGTGTRAA-
-AGGTGTTAAT
A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTGTRAA-
TNNTGCTACTGTNNNN
A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTAGTGTRAA-
AAGGTGTGAAA
A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTGTRAA-
CNNNGCTACTGTANNN
A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTAGTGTRAA
AAGGTGTKAA
A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTAGTGTRAA-----
NCWRWGTAAACANSV
A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTAGTGTRAA
AANTCATGCGTGAA
A C G T A C G T A C G T A C G T A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTAGTGTRAA
-AGGTGTGA-
A G T C G C A T C G T A A C T G G A C T C T A G A G C T T C A G C T G A C G T A
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T