Information for 6-ATCATTCTGA (Motif 12)

T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A
Reverse Opposite:
A C G T G T A C C G T A A T C G C G T A G T C A A C G T A T C G C G T A A G C T
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif57.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.8 +/- 31.3bp
Average Position of motif in Background38.9 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCATTCTGA---
CTATAATTGTTAGCG
 A C G T A C G T T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATCATTCTGA----
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCATTCTGA
CTCATTGTC-
 T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCATTCTGA---
CTTTCANTATGACTV
 A C G T A C G T T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCATTCTGA
AATTATT----
 A C G T T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATCATTCTGA
--CTTTGT--
 T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATCATTCTGA
-TCAGTCTT-
 T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATTCTGA--
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATCATTCTGA
GTCATN----
 T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCATTCTGA
CCATCAATCAAA
 A C G T A C G T T C G A A C G T A T G C C G T A A C G T A C G T A T G C A C G T A C T G G T C A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A