Information for 6-TTGAATTGTGGGA (Motif 11)

A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C C G T A A G T C C G T A C T G A C A G T C G A T A G T C C G T A G T C A
p-value:1e-8
log p-value:-2.049e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.0 +/- 21.3bp
Average Position of motif in Background70.3 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTGAATTGTGGGA-
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGAATTGTGGGA---
-RGSMTBCTGGGAAAT
 A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAATTGTGGGA
NNNTATTGAATTGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTGAATTGTGGGA--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGAATTGTGGGA
TTGACTTTT----
 A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGAATTGTGGGA
ATTTGAATT------
 A C G T A C G T A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGAATTGTGGGA--
-AAAATTGTTATGAA
 A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TTGAATTGTGGGA---
------CSTGGGAAAD
 A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGAATTGTGGGA
-TGATTTATGGC-
 A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A
A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGAATTGTGGGA
NNATNAATTGTTTNN
 A C G T A C G T A C G T A C G T A C T G C G T A G C T A A G C T A C G T A C T G A C G T C T A G A C T G A C T G C G T A
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T