Information for 5-GCTAKMARRTTCW (Motif 10)

A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
Reverse Opposite:
C G A T C T A G C G T A C G T A A G T C A G C T C G A T C A T G G T A C G A C T C G T A T A C G T G A C
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.595
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif7.53%
Number of Background Sequences with motif662.2
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets56.6 +/- 26.4bp
Average Position of motif in Background50.4 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCTAKMARRTTCW-
TTCTAGAABNTTCTA
 A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCTAKMARRTTCW
TTCTAGAACGTTC-
 A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCTAKMARRTTCW----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTAKMARRTTCW
TTCTAGAACGTTC-
 A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTAKMARRTTCW
TTCTAGAACGTTC-
 A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTAKMARRTTCW
AGAGCCATAAAATTCG
 A C G T A C G T A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTAKMARRTTCW
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCTAKMARRTTCW
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GCTAKMARRTTCW
ADGGYAGYAGCATCT
 A C G T A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GCTAKMARRTTCW
AAAGGTAATAAAATTT-
 A C G T A C G T A C G T A C G T A C T G A T G C G C A T C T G A A C T G G T A C C G T A C T G A T C A G G C A T G C A T A G T C G C T A
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T