Information for 3-RVAAVTGAAA (Motif 4)

C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A
Reverse Opposite:
G C A T A G C T A G C T A T G C C G T A A T G C C G A T G C A T A G C T G A T C
p-value:1e-41
log p-value:-9.531e+01
Information Content per bp:1.469
Number of Target Sequences with motif177.0
Percentage of Target Sequences with motif21.22%
Number of Background Sequences with motif3140.3
Percentage of Background Sequences with motif6.74%
Average Position of motif in Targets49.2 +/- 26.4bp
Average Position of motif in Background50.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:RVAAVTGAAA--
GRAASTGAAAST
 C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:RVAAVTGAAA--
GAAAGTGAAAGT
 C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:RVAAVTGAAA--
GGAAGTGAAAST
 C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:RVAAVTGAAA--
GAAAMTGAAACT
 C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:RVAAVTGAAA--
GAAACTGAAACT
 C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-RVAAVTGAAA-
CGGAAGTGAAAC
 A C G T C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:RVAAVTGAAA--
GAAASYGAAASY
 C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----RVAAVTGAAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-RVAAVTGAAA----
GGAAANTGAAACTNA
 A C G T C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-RVAAVTGAAA----
AGAAAGTGAAAGTGA
 A C G T C T A G T C G A C G T A G C T A T A C G G C A T T A C G T C G A T C G A C G T A A C G T A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A