Information for 19-SCARAAAAHCCCC (Motif 21)

T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C
Reverse Opposite:
A C T G A C T G C A T G A T C G C G A T G C A T G C A T C G A T G C A T A G C T C A G T A C T G A T G C
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.571
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif447.4
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets59.4 +/- 24.9bp
Average Position of motif in Background51.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:SCARAAAAHCCCC
--GGAAATCCCC-
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:SCARAAAAHCCCC
---GGAAANCCCC
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:SCARAAAAHCCCC--
GAAAAAATTGCAAGG
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:SCARAAAAHCCCC-
--GGGAAATCCCCN
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:SCARAAAAHCCCC
--GGAAATTCCC-
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:SCARAAAAHCCCC
--GGAAATTCCC-
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----SCARAAAAHCCCC
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SCARAAAAHCCCC------
--AGGAGACCCCCAATTTG
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----SCARAAAAHCCCC
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:SCARAAAAHCCCC--
-----AAGACCCYYN
 T A C G T G A C G T C A T C G A C G T A C G T A C G T A C G T A G C T A T A G C G A T C G T A C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C