Information for 15-TTCACACTCTGTG (Motif 19)

G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
Reverse Opposite:
A T G C C G T A G T A C C T G A A C T G C G T A A C T G A C G T A C T G C A G T A T C G C G T A C G T A
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.775
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets46.3 +/- 29.2bp
Average Position of motif in Background48.9 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTCACACTCTGTG
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCACACTCTGTG
TTCACACCTT---
 G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCACACTCTGTG
NTTTTCACACCTT---
 A C G T A C G T A C G T G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTCACACTCTGTG
TTMACACCTT---
 G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACTCTGTG
TTTCACACCTN---
 A C G T G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTCACACTCTGTG-
GTCACGCTCNCTGA
 G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTCACACTCTGTG
-TCACACCT----
 G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACTCTGTG
KTTCACACCT----
 A C G T G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACTCTGTG
TTTCACACCT----
 A C G T G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACTCTGTG
CTTCACACCTA---
 A C G T G C A T A C G T A T G C G T C A T A G C G T C A A G T C G A C T G T A C A G C T A C T G C G A T A T C G
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T