Information for 9-CAGTGACTTCACA (Motif 13)

A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C T G C T G A C T G A A C T G C G A T A T G C G C T A A T G C A G C T C T A G
p-value:1e-12
log p-value:-2.765e+01
Information Content per bp:1.805
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.6 +/- 29.2bp
Average Position of motif in Background42.2 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAGTGACTTCACA
CGGTGACGTCAC-
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGACTTCACA--
NCGATGACGTCATCGN
 A C G T A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A A C G T A C G T
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGTGACTTCACA
NGRTGACGTCAY-
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGTGACTTCACA
NRRTGACGTCAT-
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGTGACTTCACA
---TGACGTCA--
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CAGTGACTTCACA----
------CTTCACACCTA
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGTGACTTCACA
NGATGACGTCAT-
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGTGACTTCACA
---TGACGTCATC
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGTGACTTCACA
--TCCAATCCACA
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGTGACTTCACA
NGATGACGTCAT-
 A G T C C T G A A T C G C G A T A T C G C G T A A G T C A G C T A G C T A G T C C G T A A G T C C G T A
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T