Information for 9-CCCCAGGGGA (Motif 12)

A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A
Reverse Opposite:
C A G T G A T C A T G C A T G C A G T C G C A T C T A G A C T G C A T G T C A G
p-value:1e-14
log p-value:-3.334e+01
Information Content per bp:1.650
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.63%
Number of Background Sequences with motif1393.7
Percentage of Background Sequences with motif2.99%
Average Position of motif in Targets46.4 +/- 27.0bp
Average Position of motif in Background49.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGGA
GTCCCCAGGGGA
 A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGGA
NGTCCCNNGGGA
 A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAGGGGA--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCCCAGGGGA-
TTGCCCTAGGGCAT
 A C G T A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCCCAGGGGA-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAGGGGA--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGGGA--
ATTCCCAAGGGAAT
 A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCCCAGGGGA-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCCAGGGGA-
GCCTCAGGGCAT
 A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAGGGGA-
CCCCCCCGGGGGNN
 A C G T A C G T A C G T A G T C G T A C T G A C G A T C C G T A T C A G T A C G T A C G C T A G G T C A A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G