Information for 4-GGGAATTCCC (Motif 3)

T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C
Reverse Opposite:
C T A G C T A G C T A G T C G A G C T A C G A T A G C T A G T C G A T C A G T C
p-value:1e-40
log p-value:-9.319e+01
Information Content per bp:1.671
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.42%
Number of Background Sequences with motif455.0
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets49.0 +/- 24.5bp
Average Position of motif in Background49.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GGGAATTCCC--
GGGAAATCCCCN
 T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GGGAATTCCC
GGGAATTTCC
 T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GGGAATTCCC
GGGGATTTCC
 T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGGAATTCCC
GGGAATTTCC
 T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GGGAATTCCC-
-GGAAANCCCC
 T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGGAATTCCC--
GGGGATTCCCCC
 T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GGGAATTCCC--
AGGGGATTCCCCT
 A C G T T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C A C G T A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GGGAATTCCC--
AGGGGATTCCCCT
 A C G T T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C A C G T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTCCC
CCWGGAATGY--
 A C G T A C G T T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGAATTCCC
NCTGGAATGC--
 A C G T A C G T T C A G C T A G T C A G T C G A G C T A C G A T A G C T G A T C G A T C G A T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T