Information for 14-MASCWGTWAT (Motif 20)

T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T
Reverse Opposite:
C G T A G C A T C G T A G T C A A T G C C G T A C T A G T A C G A G C T A C G T
p-value:1e-10
log p-value:-2.324e+01
Information Content per bp:1.514
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif742.6
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets48.8 +/- 24.8bp
Average Position of motif in Background48.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0102.1_Meis1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT---
AATTACCTGTCAATAC
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---MASCWGTWAT----
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0108.1_Msx3/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT---
CAAAACCAATTAATTT
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0005.1_Barhl1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT---
AACAACCAATTAATTC
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:MASCWGTWAT
-ACCAATTA-
 T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T
A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---MASCWGTWAT----
CATAACCACTTAACAAC
 A C G T A C G T A C G T T G C A T C G A A T G C G A T C G C A T T A C G C A G T G C A T C G T A G C A T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C