Information for 10-TTCGCTTTACGGC (Motif 16)

C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C T G G T A C A C T G T G C A C G T A
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 19.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTCGCTTTACGGC-
--DGWTTTATGRCN
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCGCTTTACGGC-----
-TCNCTTTACAGCGNNNT
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCGCTTTACGGC----
-ANNTTTTACGACNTNN
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTCGCTTTACGGC-----
-TCNNTTTACAGCGNNNT
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTCGCTTTACGGC-----
-TCNNTTTACAGCGNNNT
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTCGCTTTACGGC----
-NNNTTTTACGACNTTN
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTCGCTTTACGGC----
-NNGTTTTACGACTTTA
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCGCTTTACGGC-
---NTTTTACGACT
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T
A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCGCTTTACGGC-
---NTTTTACGACC
 C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C A C G T
A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------TTCGCTTTACGGC
GTTTTGCTTTCACTTTCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C A C T G A G T C A C G T A C G T A C G T C G T A A G T C A C T G C T A G A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T A C G T