Information for 9-TTGAHCTTTCRGA (Motif 15)

A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T T A C G G T C A G T C A C G T A T C A G C A G T C A G T T A G C C G T A T C G A
p-value:1e-11
log p-value:-2.654e+01
Information Content per bp:1.738
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif95.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets42.7 +/- 26.7bp
Average Position of motif in Background47.7 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTGAHCTTTCRGA
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGAHCTTTCRGA
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGAHCTTTCRGA
-TGACCTTTNCNT
 A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTGAHCTTTCRGA
CCTTTGATCTTT----
 A C G T A C G T A C G T A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGAHCTTTCRGA
CTGACCTTTG---
 A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGAHCTTTCRGA
TTGACTTTT----
 A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTGAHCTTTCRGA
CNNTTGACCTTTG---
 A C G T A C G T A C G T A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGAHCTTTCRGA
GTGACCTT-----
 A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTGAHCTTTCRGA
AACCCTTTGATCTTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGAHCTTTCRGA
ANTTTCGCTTTCGN-
 A C G T A C G T A C G T A C G T A T C G G C T A G T C A A G T C A C G T A C G T A C G T A T G C C T G A A C T G C G T A
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T