Information for 9-GCTGMYSCGCCTCMMW (Motif 9)

A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
Reverse Opposite:
C G T A A C T G A C T G A C T G C G T A A T C G A C T G A G T C C T A G A T G C C T G A A C T G A G T C C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.6 +/- 25.6bp
Average Position of motif in Background35.8 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTGMYSCGCCTCMMW
--GGCCCCGCCCCC--
 A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTGMYSCGCCTCMMW--
---GCCCCGCCCCCTCCC
 A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGMYSCGCCTCMMW
-NAGCCCCGCCCCCN-
 A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTGMYSCGCCTCMMW
---GCCCCGCCCCC--
 A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTGMYSCGCCTCMMW
---GCTCCGCCCMCY-
 A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTGMYSCGCCTCMMW
---GCTCGGSCTC---
 A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTGMYSCGCCTCMMW
GYCTGGYYTNTGTCA--
 A C G T A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTGMYSCGCCTCMMW-
TACGCCCCGCCACTCTG
 A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTGMYSCGCCTCMMW
NGCTN------------
 A C G T A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCTGMYSCGCCTCMMW
AATTTGCTGAC----------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G G T A C A G C T A T C G A G T C A C T G A G T C A T G C A C G T A G T C G T A C G T A C C G A T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T