Information for 11-GTTTTTAATC (Motif 22)

A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C G T A C G T A C G T A G T C A C T G A A G T C
p-value:1e-4
log p-value:-1.101e+01
Information Content per bp:1.927
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.0 +/- 33.4bp
Average Position of motif in Background53.6 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GTTTTTAATC
---TTTAAT-
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTTTTAATC-------
NTTGTTAATCCCTCTNN
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GTTTTTAATC--
----TTAATCCT
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GTTTTTAATC--
----TTAATCCG
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GTTTTTAATC--
----TTAATCCC
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GTTTTTAATC--
----YTAATCCY
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTTAATC---
NNNTTTNTAATACNG
 A C G T A C G T A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTTTTTAATC---
---NYTAATCCYB
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTTTTTAATC---
---CCTAATCCGC
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTTTTTAATC--
-ATATTAATTAA
 A C T G A G C T A C G T A C G T A C G T A C G T C G T A T G C A A C G T A G T C A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A