Information for 11-AGTGCTTAKW (Motif 16)

C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A
Reverse Opposite:
C G A T G T C A A C G T C G T A C G T A A T C G A G T C C G T A A G T C A C G T
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.876
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif77.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets48.5 +/- 27.7bp
Average Position of motif in Background51.4 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTTAKW
TTAAGTGCTT---
 A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTTAKW--
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTTAKW--
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGTGCTTAKW
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTTAKW-
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTGCTTAKW
TATTGTTTATT
 A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTTAKW
TTGAGTGSTT---
 A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGCTTAKW
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTTAKW--
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCTTAKW
CTYRAGTGSY----
 A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C T G A T G C A C G T C G A T C G T A A C G T C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T